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guides:slurm:array-job [06.03.2020 10:50]
Juha Kekäläinen
guides:slurm:array-job [07.06.2021 11:56]
Administrator
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 #SBATCH --output fastq_%A_%a.out.out            # Standard output goes to here #SBATCH --output fastq_%A_%a.out.out            # Standard output goes to here
 #SBATCH --error fastqc_%A_%a.err                # Standard error goes to here #SBATCH --error fastqc_%A_%a.err                # Standard error goes to here
-##SBATCH --mail-user username@uef.fi            # this is the email you wish to be notified at +#SBATCH --mail-user username@uef.fi            # this is the email you wish to be notified at 
-##SBATCH --mail-type ALL                        # ALL will alert you of job beginning, completion, failure etc+#SBATCH --mail-type ALL                        # ALL will alert you of job beginning, completion, failure etc
 #SBATCH --array=1-100%3                         # Array range and number of simultanous jobs #SBATCH --array=1-100%3                         # Array range and number of simultanous jobs
 +#SBATCH --auks=yes                         # Enable kerberos support with auks
  
 # Make sure that the results directory exists # Make sure that the results directory exists
guides/slurm/array-job.txt · Last modified: 18.11.2021 11:19 by Administrator