Tuma (finnish word for Nucleus) computing server is meant for an interactive computing workloads. In addition to the traditional SSH terminal access the server provides graphical desktop environment that can be used with the Remote Desktop Connection Protocol.

Server address: tuma.uef.fi

• CPU: 2x AMD EPYC 7302 / 64 threads
• RAM: 1024 GB
• OS: Rocky Linux 8

Server is connected to the storage space provided by the UEF IT Services for Research. More information can be found from the dedicated page.

All the available reference data sets are provided as-is. They are unmodified copies of the original files.

URL: https://support.illumina.com/sequencing/sequencing_software/igenome.html

Following reference genomes can be found from the /apps/genomes/iGenomes folder.

URL: https://gnomad.broadinstitute.org/downloads

Following variants can be found from the /research/groups/bioinformaticians/gnomAD-hg19-r2.1.1 folder.

System provides various graphical and terminal applications for the researchers.

Additionally to browser, office-suite and text editors the following graphical applications are available:

To see the list of terminal application visit the available applications web page.