guides:slurm:using-r
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| Both sides previous revision Previous revision Next revision | Previous revision | ||
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guides:slurm:using-r [23.09.2019 11:12] Teemu Kuulasmaa |
guides:slurm:using-r [18.11.2021 11:19] (current) Administrator |
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| - | # Using R with SLURM | + | # Using R with Slurm |
| Example script (**hello.R**): | Example script (**hello.R**): | ||
| Line 30: | Line 30: | ||
| #SBATCH --mail-type ALL # ALL will alert you of job beginning, completion, failure etc | #SBATCH --mail-type ALL # ALL will alert you of job beginning, completion, failure etc | ||
| - | module load r # load modules | + | module load r/ |
| Rscript hello.R # Execute the script | Rscript hello.R # Execute the script | ||
| ``` | ``` | ||
| - | The last step is to submit the job to the compute queue with the **[sbatch](https:// | + | The last step is to submit the job to the compute queue with the **[sbatch](https:// |
| ``` | ``` | ||
| sbatch scriptR.sbatch | sbatch scriptR.sbatch | ||
| ``` | ``` | ||
guides/slurm/using-r.1569226326.txt.gz · Last modified: 29.10.2019 15:10 (external edit)