name	Unique Positions	Total Tags
genome=mm9	32795502	41185194.0
fragmentLengthEstimate=75		
peakSizeEstimate=75		
tagsPerBP=0.015590		
averageTagsPerPosition=1.255		
averageTagLength=37.172		
gsizeEstimate=2641822305		
averageFragmentGCcontent=0.456		
chr1	2236140	2826640.0
chr2	2530216	3134655.0
chr3	1694217	2144041.0
chr4	2146520	2773223.0
chr5	2142331	2721752.0
chr6	2016674	2460934.0
chr7	1818496	2230739.0
chr8	1723203	2148380.0
chr9	1688547	2198097.0
chr10	1600789	1911605.0
chr11	2216180	2962056.0
chr12	1307209	1566009.0
chr13	1284933	1570754.0
chr14	1402603	1671105.0
chr15	1394758	1711872.0
chr16	1153303	1422160.0
chr17	1343402	1622722.0
chr18	1140255	1418316.0
chr19	1372309	1926020.0
chrX	559034	725276.0
chrY	14881	16491.0
chrM	9502	22347.0
cmd=makeTagDirectory /home/data/data_merja/ngs_pipelines/grores/tagdirs/GSE59486_7h_UCSC_mm9 GSE59486_7h_UCSC_mm9_filtered.bed -genome mm9 -checkGC -fragLength 75