name	Unique Positions	Total Tags
genome=mm9	21626004	27077010.0
fragmentLengthEstimate=75		
peakSizeEstimate=75		
tagsPerBP=0.010249		
averageTagsPerPosition=1.251		
averageTagLength=37.224		
gsizeEstimate=2641798683		
averageFragmentGCcontent=0.462		
chr1	1487084	1867139.0
chr2	1637360	1978747.0
chr3	1099627	1403314.0
chr4	1413494	1809536.0
chr5	1408012	1744269.0
chr6	1294638	1588698.0
chr7	1221862	1493204.0
chr8	1150031	1406408.0
chr9	1147109	1472247.0
chr10	1032846	1232594.0
chr11	1488438	1958668.0
chr12	889029	1071568.0
chr13	875157	1122600.0
chr14	884271	1055121.0
chr15	884535	1061736.0
chr16	748364	930682.0
chr17	893615	1082739.0
chr18	768519	1005219.0
chr19	913368	1262177.0
chrX	376443	512845.0
chrY	8747	9726.0
chrM	3455	7773.0
cmd=makeTagDirectory /home/data/data_merja/ngs_pipelines/grores/tagdirs/GSE59486_22h_2_UCSC_mm9 GSE59486_22h_2_UCSC_mm9_filtered.bed -genome mm9 -checkGC -fragLength 75