name	Unique Positions	Total Tags
genome=mm9	36210813	44922510.0
fragmentLengthEstimate=75		
peakSizeEstimate=75		
tagsPerBP=0.017004		
averageTagsPerPosition=1.239		
averageTagLength=35.611		
gsizeEstimate=2641837774		
averageFragmentGCcontent=0.456		
chr1	2500166	3161716.0
chr2	2755238	3338247.0
chr3	1878828	2369530.0
chr4	2371637	2969185.0
chr5	2342904	2962730.0
chr6	2148540	2619491.0
chr7	2014715	2413690.0
chr8	1863094	2305771.0
chr9	1978410	2523819.0
chr10	1736668	2040831.0
chr11	2429149	3154580.0
chr12	1493419	1796520.0
chr13	1457289	1785015.0
chr14	1556615	1843205.0
chr15	1482788	1789227.0
chr16	1341859	1615283.0
chr17	1479205	1763295.0
chr18	1260372	1569546.0
chr19	1470878	2093210.0
chrX	626486	776617.0
chrY	15259	16513.0
chrM	7294	14489.0
cmd=makeTagDirectory /home/data/data_merja/ngs_pipelines/grores/tagdirs/GSE59486_13h_UCSC_mm9 GSE59486_13h_UCSC_mm9_filtered.bed -genome mm9 -checkGC -fragLength 75