name	Unique Positions	Total Tags
genome=mm9	22882387	26742303.0
fragmentLengthEstimate=75		
peakSizeEstimate=75		
tagsPerBP=0.010123		
averageTagsPerPosition=1.169		
averageTagLength=38.679		
gsizeEstimate=2641796137		
averageFragmentGCcontent=0.443		
chr1	1632284	1968542.0
chr2	1818065	2105925.0
chr3	1171468	1361239.0
chr4	1477425	1763691.0
chr5	1453690	1734296.0
chr6	1397337	1610059.0
chr7	1218287	1380737.0
chr8	1131586	1309452.0
chr9	1206573	1475396.0
chr10	1107414	1231522.0
chr11	1475650	1777458.0
chr12	952950	1074486.0
chr13	930702	1071987.0
chr14	1017706	1157466.0
chr15	924189	1038813.0
chr16	847969	951962.0
chr17	926218	1039442.0
chr18	780032	898122.0
chr19	994579	1299371.0
chrX	403531	471179.0
chrY	10325	10805.0
chrM	4407	10353.0
cmd=makeTagDirectory /home/data/data_merja/ngs_pipelines/grores/tagdirs/GSE59486_10h_RevERbKO_UCSC_mm9 GSE59486_10h_RevERbKO_UCSC_mm9_filtered.bed -genome mm9 -checkGC -fragLength 75