name	Unique Positions	Total Tags
genome=mm9	17517836	20455318.0
fragmentLengthEstimate=75		
peakSizeEstimate=75		
tagsPerBP=0.007743		
averageTagsPerPosition=1.168		
averageTagLength=36.679		
gsizeEstimate=2641668766		
averageFragmentGCcontent=0.452		
chr1	1233521	1461708.0
chr2	1409587	1634605.0
chr3	914093	1055271.0
chr4	1128151	1353926.0
chr5	1096319	1266705.0
chr6	1016406	1138373.0
chr7	957199	1077985.0
chr8	918858	1080914.0
chr9	918815	1177473.0
chr10	876371	987201.0
chr11	1183158	1455714.0
chr12	684765	766957.0
chr13	687283	762904.0
chr14	759047	855091.0
chr15	733895	827627.0
chr16	636782	711679.0
chr17	730329	821455.0
chr18	601140	686573.0
chr19	727261	954216.0
chrX	290236	353257.0
chrY	8636	8973.0
chrM	5984	16711.0
cmd=makeTagDirectory /home/data/data_merja/ngs_pipelines/grores/tagdirs/GSE59486_10h_RevERbControl_UCSC_mm9 GSE59486_10h_RevERbControl_UCSC_mm9_filtered.bed -genome mm9 -checkGC -fragLength 75