name	Unique Positions	Total Tags
genome=mm9	17633942	22509885.0
fragmentLengthEstimate=75		
peakSizeEstimate=75		
tagsPerBP=0.008521		
averageTagsPerPosition=1.274		
averageTagLength=38.824		
gsizeEstimate=2641798379		
averageFragmentGCcontent=0.469		
chr1	1190230	1517663.0
chr2	1321681	1626810.0
chr3	908589	1172593.0
chr4	1171364	1544694.0
chr5	1147449	1487981.0
chr6	1026423	1261195.0
chr7	1013792	1274424.0
chr8	910345	1129865.0
chr9	960503	1264211.0
chr10	821493	992760.0
chr11	1243065	1680059.0
chr12	708387	865108.0
chr13	692667	893968.0
chr14	740017	900894.0
chr15	755966	936573.0
chr16	623834	820076.0
chr17	716100	875757.0
chr18	594701	761696.0
chr19	787493	1099428.0
chrX	290642	392007.0
chrY	7238	8123.0
chrM	1963	4000.0
cmd=makeTagDirectory /home/data/data_merja/ngs_pipelines/grores/tagdirs/GSE59486_10h_2_UCSC_mm9 GSE59486_10h_2_UCSC_mm9_filtered.bed -genome mm9 -checkGC -fragLength 75