name	Unique Positions	Total Tags
genome=mm9	12980300	15775148.0
fragmentLengthEstimate=75		
peakSizeEstimate=75		
tagsPerBP=0.005971		
averageTagsPerPosition=1.215		
averageTagLength=38.579		
gsizeEstimate=2641786545		
averageFragmentGCcontent=0.467		
chr1	856858	1043820.0
chr2	1002260	1173870.0
chr3	658540	812398.0
chr4	845129	1044331.0
chr5	805602	953891.0
chr6	792325	949504.0
chr7	741247	887252.0
chr8	697078	827308.0
chr9	698312	869389.0
chr10	638416	745155.0
chr11	911116	1171443.0
chr12	536806	650040.0
chr13	500983	617063.0
chr14	528730	619192.0
chr15	533573	623807.0
chr16	454506	561421.0
chr17	530066	631252.0
chr18	456661	560723.0
chr19	564556	732715.0
chrX	218887	287705.0
chrY	5323	5808.0
chrM	3326	7061.0
cmd=makeTagDirectory /home/data/data_merja/ngs_pipelines/grores/tagdirs/GSE59486_0h_UCSC_mm9 GSE59486_0h_UCSC_mm9_filtered.bed -genome mm9 -checkGC -fragLength 75