Once finished, you will want to upload the following hub URL: http://bioinformatics.uef.fi/biowhat/groseq/K562_COMBINED_update/hub.txt If loading to the Wash U Epigenome Browser, use: http://bioinformatics.uef.fi/biowhat/groseq/K562_COMBINED_update/washU.hub.txt Visualization fragment length = 75 Output file: /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/K562/K562.ucsc.bigWig No need to remove tags to get desired file size Generating bedGraph for chr1 Generating bedGraph for chr2 Generating bedGraph for chr3 Generating bedGraph for chr4 Generating bedGraph for chr5 Generating bedGraph for chr6 Generating bedGraph for chr7 Generating bedGraph for chr8 Generating bedGraph for chr9 Generating bedGraph for chr10 Generating bedGraph for chr11 Generating bedGraph for chr12 Generating bedGraph for chr13 Generating bedGraph for chr14 Generating bedGraph for chr15 Generating bedGraph for chr16 Generating bedGraph for chr17 Generating bedGraph for chr18 Generating bedGraph for chr19 Generating bedGraph for chr20 Generating bedGraph for chr21 Generating bedGraph for chr22 Generating bedGraph for chrX Generating bedGraph for chrY Creating bigWig from bedGraph /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/K562/K562.ucsc.bigWig Visualization fragment length = 75 Output file: /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/K562/K562.ucsc.bigWig No need to remove tags to get desired file size Generating reverse strand bedGraph for chr1 Generating reverse strand bedGraph for chr2 Generating reverse strand bedGraph for chr3 Generating reverse strand bedGraph for chr4 Generating reverse strand bedGraph for chr5 Generating reverse strand bedGraph for chr6 Generating reverse strand bedGraph for chr7 Generating reverse strand bedGraph for chr8 Generating reverse strand bedGraph for chr9 Generating reverse strand bedGraph for chr10 Generating reverse strand bedGraph for chr11 Generating reverse strand bedGraph for chr12 Generating reverse strand bedGraph for chr13 Generating reverse strand bedGraph for chr14 Generating reverse strand bedGraph for chr15 Generating reverse strand bedGraph for chr16 Generating reverse strand bedGraph for chr17 Generating reverse strand bedGraph for chr18 Generating reverse strand bedGraph for chr19 Generating reverse strand bedGraph for chr20 Generating reverse strand bedGraph for chr21 Generating reverse strand bedGraph for chr22 Generating reverse strand bedGraph for chrX Generating reverse strand bedGraph for chrY Creating bigWig from bedGraph /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/K562/K562.ucsc.bigWig All finished: you will want to upload the following hub URL: http://bioinformatics.uef.fi/biowhat/groseq/K562_COMBINED_update/hub.txt If loading to the Wash U Epigenome Browser, use: http://bioinformatics.uef.fi/biowhat/groseq/K562_COMBINED_update/washU.hub.txt To edit track settings, edit files in: /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/hubs/K562_COMBINED_update Once finished, you will want to upload the following hub URL: http://bioinformatics.uef.fi/biowhat/groseq/GM_pool_COMBINED_update/hub.txt If loading to the Wash U Epigenome Browser, use: http://bioinformatics.uef.fi/biowhat/groseq/GM_pool_COMBINED_update/washU.hub.txt Visualization fragment length = 75 Output file: /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/GM_pool/GM_pool.ucsc.bigWig No need to remove tags to get desired file size Generating bedGraph for chr1 Generating bedGraph for chr2 Generating bedGraph for chr3 Generating bedGraph for chr4 Generating bedGraph for chr5 Generating bedGraph for chr6 Generating bedGraph for chr7 Generating bedGraph for chr8 Generating bedGraph for chr9 Generating bedGraph for chr10 Generating bedGraph for chr11 Generating bedGraph for chr12 Generating bedGraph for chr13 Generating bedGraph for chr14 Generating bedGraph for chr15 Generating bedGraph for chr16 Generating bedGraph for chr17 Generating bedGraph for chr18 Generating bedGraph for chr19 Generating bedGraph for chr20 Generating bedGraph for chr21 Generating bedGraph for chr22 Generating bedGraph for chrX Generating bedGraph for chrY Generating bedGraph for chrM Creating bigWig from bedGraph /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/GM_pool/GM_pool.ucsc.bigWig Visualization fragment length = 75 Output file: /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/GM_pool/GM_pool.ucsc.bigWig No need to remove tags to get desired file size Generating reverse strand bedGraph for chr1 Generating reverse strand bedGraph for chr2 Generating reverse strand bedGraph for chr3 Generating reverse strand bedGraph for chr4 Generating reverse strand bedGraph for chr5 Generating reverse strand bedGraph for chr6 Generating reverse strand bedGraph for chr7 Generating reverse strand bedGraph for chr8 Generating reverse strand bedGraph for chr9 Generating reverse strand bedGraph for chr10 Generating reverse strand bedGraph for chr11 Generating reverse strand bedGraph for chr12 Generating reverse strand bedGraph for chr13 Generating reverse strand bedGraph for chr14 Generating reverse strand bedGraph for chr15 Generating reverse strand bedGraph for chr16 Generating reverse strand bedGraph for chr17 Generating reverse strand bedGraph for chr18 Generating reverse strand bedGraph for chr19 Generating reverse strand bedGraph for chr20 Generating reverse strand bedGraph for chr21 Generating reverse strand bedGraph for chr22 Generating reverse strand bedGraph for chrX Generating reverse strand bedGraph for chrY Generating reverse strand bedGraph for chrM Creating bigWig from bedGraph /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/GM_pool/GM_pool.ucsc.bigWig All finished: you will want to upload the following hub URL: http://bioinformatics.uef.fi/biowhat/groseq/GM_pool_COMBINED_update/hub.txt If loading to the Wash U Epigenome Browser, use: http://bioinformatics.uef.fi/biowhat/groseq/GM_pool_COMBINED_update/washU.hub.txt To edit track settings, edit files in: /research/groups/biowhat_share/CELLShuman/merja_wrk/CELLShuman/mari_wrk/updated_coords_run/updated_combined_tags/hubs/GM_pool_COMBINED_update