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guides:slurm:nextflow [08.03.2024 15:00]
Administrator
guides:slurm:nextflow [08.03.2024 15:12] (current)
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-Following example can be used as a nextflow.config file.+Following example can be used as a [nextflow.config](https://www.nextflow.io/docs/latest/config.html) file.
  
  
  
-    //Profile config names for nf-core/configs 
     params {     params {
       config_profile_description = 'The University of Eastern Finland SLURM cluster profile'       config_profile_description = 'The University of Eastern Finland SLURM cluster profile'
Line 35: Line 34:
       time = '1.d'       time = '1.d'
       cpus = 8       cpus = 8
-      memory = '50 GB'+      memory = '20 GB'
            
       clusterOptions = '--job-name=nfSLURM \       clusterOptions = '--job-name=nfSLURM \
     --output=/directory/for/slurm/outputs/2024-03-08_output.txt \     --output=/directory/for/slurm/outputs/2024-03-08_output.txt \
-    --error=/directory/for/slurm/error/outputs/2023-03-08_log-error.txt \+    --error=/directory/for/slurm/error/outputs/2024-03-08_log-error.txt \
     }     }
            
     params {     params {
-      max_memory = 100.GB+      max_memory = 50.GB
       max_cpus = 32       max_cpus = 32
       max_time = 3.d       max_time = 3.d
guides/slurm/nextflow.1709902846.txt.gz · Last modified: 08.03.2024 15:00 by Administrator